Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915137.1_cds_XP_016465017.1_58004
CDS Infomation

[gene=LOC107787916] [db_xref=GeneID:107787916] [protein=nuclear poly(A) polymerase 4-like isoform X1] [protein_id=XP_016465017.1] [location=complement(join(43139..44197,44342..44506,44582..44911,45010..45072,45170..45283,45728..45889,45963..46025,46930..47037,48392..48469,48566..48685))] [gbkey=CDS]
Sequence

ATGGGGGTTTCCAATTGTGCTACTACTTTACCGCCGTCCAAGCAGTATGGGGTGACGAAA
CCTTTGTCTCTAGCTGGGCCTACGGAGGCTGATATTCAGCGTACCAAAGAGTTGGAAAAG
TTTTTGGTCGGTGCTGGATTGTATGAAAGCGCTGAGGAGGCTGCTAAGAGAGAACGAGTT
CTCTGCCAGCTTAAGCAGATTGTGAAGGACTGGGTGAAAGAACTTACTCGGCTGAGAGGG
TACAGTGATCAGATGATTGAGGATGCAAATGCTGTCATTTTAACCTTTGGTTCTTATCGG
CTTGGGGTGCATGGTCCTGGAGCTGACATAGACACCTTATGTGTTGGACCATCCTATGTG
AATCGAGAGGATGACTTCTTCTTTGTATTGCATAATATTTTGGCGAAGAGGGAAGAAGTT
ACAGAACTACAACCAGTTCCAGATGCACATGTCCCTGTTATGAAGTTTAAGTTTGACGGG
ATCTCAATTGATCTTCTCTATGCAAGCATTTCTCTTTTGGTTGTACCCGATGATTTGGAC
ATATCCAGTGAAACCATGTTATGCAATGTTGATGAACCAACTGTAAGGAGCCTCAATGGC
TGCAGGGTGGCTGATAAAATCATTAAACTTGTTCCAAATATTGAGTTTTTCCGAACCACA
CTTCGATGTTTAAAGTTTTGGGCTAAACAGCGTGGTGTTTATTCAAATGTAACTGGGTTT
CTTGGTGGAGTGAACTGGGCTCTTCTGGTTGCTCGGGTTTGCCAACTCTATCCAAATGCT
GTTCCGAGTATGCTGGTTTCTCGTTTCTTTCGGGTATATACACAATGGCGCTGGCCAAAT
CCTGTGATGCTTTGTCAGATAGAGGATAAAGAACTTGGATTCTCTGTCTGGGATCCACGA
AAAAATCCTTGGGACCGGACACATCAGATGCCAATTATTACACCTGCCTATCCTTGCATG
AACTCAAGCTACAACGTCTCTGCAAGTACTCTTCGAGTTATGACGGAACAATTTCAATTC
GGTAACAACATATGTCAGGAAATTGAGCTGAATAAAGCTCAGTGGACTGTACTGTTTGAG
CAGTATCCTTTCTTCGAAAGCTACAAGAATTATTTGCAAGTTGACATAGTTGCAGCTGAT
GCTGATGACTTGCTTGTATGGAGAGGCTGGGTTGAATCCCGATTAAGGCAGCTTACTTTG
ATGATAGAGCGGGACACATATGGGAAGTTGCAGTGCCATCCTTATCCCCATGAGTATGTG
GATCCCTTCAAACAATGTGCCCATCGTGCCTTCTTCATGGGTTTGCAGAGGAGGCAAGGG
GAGTTAGGTCAAGAAGGCCAGCAATTTGATATTCGTGGGACAGTTGATGAGTTTAGACAC
CAAATAAACATGTATATGTATTGGAAACCAGGAATGGAAATGTTTGTGTCTCATGTTCGT
AGAAAACAGATTCCCTCTTATGTTCTACCAGACGGTTATAAACGAAGCCAAACAGCAAGG
ATAATGTGTGTGCAGCAGGCAGAGAAACCATCCTGCAATGATAGTGTATGCAGGTCAAGA
TCTGGAGAAAGGGGCTTGAAAAGGAAAAAAGAGCTTGAAGGTGCAGAAGAGAAGCAACAG
AGTCAGGACAAAAGACAATCTATTAGCCCTCCAAGAAGGGACTCACTTTCACCTGAACTT
ATTGTTAGTCAGAAAGGTGGCATGTTCTTACAACAGTGTTCCTCGACAGTGTCTGGAGGG
AAGAGAAAGAGTAATGAAACTTCAAATAATTTCACCAGTGCTAAGATGCAGGTTGCTATT
CTGGACAAAGATGCCTGCTCTGAACCAAGTAAGTCACAAGGAGCACAATTTGCGCAAAGT
GCTGATGGATGCGTATACCATCCTAGTGGTGTCACAAACCTCGTTGAGGTCAGTACATGT
GAGGATCCTGCACATGAATTGCTCCGACTCAGCCATGACGGTCATCTAGTGGGCAGTACT
GGTTGCAGCTCTCTCTATTCCTCTCAGGGTGACCTATACAGGGCCGAGTCCAAGTCACTA
TCAAATAATGTATGTGAAAATGCTTCAAGATTTTTTGGAGATGCGTTGCTGGAGTTAGAG
GTTCTGATTAAGTTTATTTTACCTCTTATCTCTCTGACGTCATTGATTTTTATAGTTCAT
TCATTCTTTCGTTTTTATGCATTTGCCGTTAGTTTGACTCAACACTGTTGTTGCAATTTG
CATGGACCTTTAACCAGTTTTATTTTGTTTTGTATTTCATGA

Peptide Sequence

PEP ID

XP_016465017.1
PEP Infomation

PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Nicotiana tabacum]
Sequence

MGVSNCATTLPPSKQYGVTKPLSLAGPTEADIQRTKELEKFLVGAGLYESAEEAAKRERV
LCQLKQIVKDWVKELTRLRGYSDQMIEDANAVILTFGSYRLGVHGPGADIDTLCVGPSYV
NREDDFFFVLHNILAKREEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLD
ISSETMLCNVDEPTVRSLNGCRVADKIIKLVPNIEFFRTTLRCLKFWAKQRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCQIEDKELGFSVWDPR
KNPWDRTHQMPIITPAYPCMNSSYNVSASTLRVMTEQFQFGNNICQEIELNKAQWTVLFE
QYPFFESYKNYLQVDIVAADADDLLVWRGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV
DPFKQCAHRAFFMGLQRRQGELGQEGQQFDIRGTVDEFRHQINMYMYWKPGMEMFVSHVR
RKQIPSYVLPDGYKRSQTARIMCVQQAEKPSCNDSVCRSRSGERGLKRKKELEGAEEKQQ
SQDKRQSISPPRRDSLSPELIVSQKGGMFLQQCSSTVSGGKRKSNETSNNFTSAKMQVAI
LDKDACSEPSKSQGAQFAQSADGCVYHPSGVTNLVEVSTCEDPAHELLRLSHDGHLVGST
GCSSLYSSQGDLYRAESKSLSNNVCENASRFFGDALLELEVLIKFILPLISLTSLIFIVH
SFFRFYAFAVSLTQHCCCNLHGPLTSFILFCIS

Transcript Sequence

Gene sequence data has not been registered.